primeGSR is a program for gene tree inference that takes a known species tree into account. It is based on GSR, a probabilistic model integrating gene duplication, sequence evolution and a relaxed molecular clock for substitution rates, and efficient algorithms that enables genome-wide analysis of gene families.

Mailing list

For announcements and discussion, subscribe to the Prime Users' mailing list!

Citing our work

If you use primeGSR, please cite:
Åkerborg, Sennblad, Arvestad, Lagergren, Gene tree analysis using a Bayesian integrated model for genes, sequences, and rates, submitted.