PrIME - products
List of programs
Source and binaries
The scientific impact
Following are some of the important programs in PrIME.
Gene tree analysis using a Bayesian integrated model for genes, sequences, and rates. Previously called PrIME-GSR: (a faster version was called PrIME-GSRf).
Probabilistic orthology analysis using gene evolution and sequence evolution models.
Probabilistic orthology analysis using gene evolution model.
A Tree reconciliation Viewer. This software was for a time known as "Dart", but a naming conflict has made us change the name.
Factorizing branch lengths into time and rates.